Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DRW42_04480 | Not Available | Negative | 1046589 - 1047668 | 39313.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | DRW42_04485 | Not Available | Positive | 1047862 - 1048647 | 29780.3 |
| thioredoxin family protein | DRW42_04490 | Not Available | Positive | 1048977 - 1049582 | 22589.5 |
| atp-dependent clp protease adaptor clps | DRW42_04495 | Not Available | Negative | 1049717 - 1049998 | 10950.0 |
| 3-oxoacyl-acp synthase | DRW42_04500 | Not Available | Positive | 1050171 - 1051217 | 38216.6 |
| hypothetical protein | DRW42_04510 | Not Available | Negative | 1051508 - 1053958 | 94058.7 |
| hypothetical protein | DRW42_04515 | Not Available | Negative | 1053924 - 1054949 | 39526.0 |
| d-tyrosyl-trna(tyr) deacylase | DRW42_04520 | Not Available | Positive | 1054979 - 1055431 | 16168.9 |
| glycosyl transferase | DRW42_04525 | Not Available | Positive | 1055523 - 1057064 | 58965.7 |
| hypothetical protein | DRW42_04530 | Not Available | Positive | 1057178 - 1058365 | 45658.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

