Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | DRW42_04275 | Not Available | Positive | 1004333 - 1005463 | 41123.3 |
| acetylornithine carbamoyltransferase | DRW42_04280 | Not Available | Positive | 1005635 - 1006609 | 36573.8 |
| duf1016 domain-containing protein | DRW42_04285 | Not Available | Positive | 1006620 - 1007672 | 40913.4 |
| acetylglutamate kinase | DRW42_04290 | Not Available | Positive | 1007662 - 1008498 | 29394.6 |
| pyrroline-5-carboxylate reductase | DRW42_04295 | Not Available | Positive | 1008690 - 1009502 | 28178.3 |
| acetylornithine deacetylase | DRW42_04300 | Not Available | Positive | 1009613 - 1010677 | 39143.6 |
| hypothetical protein | DRW42_04305 | Not Available | Positive | 1010887 - 1011147 | 9986.86 |
| hypothetical protein | DRW42_04310 | Not Available | Positive | 1011461 - 1011682 | 8367.98 |
| hypothetical protein | DRW42_04315 | Not Available | Positive | 1011682 - 1012014 | 12905.4 |
| argininosuccinate lyase | DRW42_04320 | Not Available | Positive | 1012109 - 1013440 | 49704.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

