Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pd-(d/e)xk nuclease family protein | DRW42_04015 | Not Available | Negative | 944502 - 947357 | 108847.0 |
| dna helicase uvrd | DRW42_04020 | Not Available | Negative | 947365 - 950583 | 122380.0 |
| dna methylase | DRW42_04025 | Not Available | Negative | 950657 - 951172 | 19801.4 |
| trna threonylcarbamoyladenosine dehydratase | DRW42_04030 | Not Available | Negative | 951316 - 952110 | 28790.4 |
| hydrolase tatd | DRW42_04035 | Not Available | Negative | 952265 - 952918 | 24350.8 |
| thioredoxin family protein | DRW42_04040 | Not Available | Positive | 953179 - 953712 | 19472.5 |
| hypothetical protein | DRW42_04045 | Not Available | Negative | 953807 - 954013 | 7874.33 |
| glycoside hydrolase family 3 | DRW42_04050 | Not Available | Negative | 954207 - 955907 | 62392.0 |
| nicotinic acid mononucleotide adenylyltransferase | DRW42_04055 | Not Available | Negative | 956004 - 956597 | 23016.7 |
| diversity-generating retroelement protein bavd family protein | DRW42_04060 | Not Available | Negative | 956659 - 957027 | 14403.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

