Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | DRW42_03965 | Not Available | Positive | 935167 - 936243 | 41271.7 |
| rna-binding transcriptional accessory protein | DRW42_03970 | Not Available | Negative | 936388 - 938679 | 84877.7 |
| hypothetical protein | DRW42_03975 | Not Available | Negative | 938805 - 940211 | 53893.8 |
| duf1801 domain-containing protein | DRW42_03980 | Not Available | Negative | 940222 - 940596 | 14227.2 |
| pentapeptide repeat-containing protein | DRW42_03985 | Not Available | Negative | 940640 - 941212 | 21692.6 |
| pyruvate dehydrogenase complex e1 component subunit beta | DRW42_03990 | Not Available | Negative | 941368 - 942354 | 35936.6 |
| hypothetical protein | DRW42_03995 | Not Available | Negative | 942689 - 943138 | 17412.7 |
| hypothetical protein | DRW42_04000 | Not Available | Negative | 943138 - 943338 | 7764.14 |
| n-acetyltransferase | DRW42_04005 | Not Available | Negative | 943368 - 943925 | 21821.1 |
| is200/is605 family transposase | DRW42_04010 | Not Available | Negative | 943928 - 944368 | 17268.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

