Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| error-prone dna polymerase | DRW42_00345 | Not Available | Positive | 75879 - 79109 | 121676.0 |
| dna ligase d | DRW42_00350 | Not Available | Negative | 79594 - 82485 | 109381.0 |
| duf3606 domain-containing protein | DRW42_00355 | Not Available | Negative | 82523 - 82681 | 5913.0 |
| glucose dehydrogenase | DRW42_00360 | Not Available | Positive | 82962 - 84161 | 44116.5 |
| gluconolaconase | DRW42_00365 | Not Available | Positive | 84163 - 85137 | 35172.1 |
| short-chain dehydrogenase | DRW42_00370 | Not Available | Negative | 85383 - 86126 | 26828.1 |
| hypothetical protein | DRW42_00375 | Not Available | Negative | 86320 - 86616 | 10924.5 |
| nad(p)h-dependent oxidoreductase | DRW42_00380 | Not Available | Negative | 86628 - 87257 | 23265.9 |
| transcriptional regulator | DRW42_00385 | Not Available | Positive | 87370 - 87780 | 15417.0 |
| gnat family n-acetyltransferase | DRW42_00390 | Not Available | Positive | 87813 - 88493 | 25473.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

