Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic-nucleotide phosphodiesterase | DRW42_03915 | Not Available | Negative | 926069 - 927031 | 35723.0 |
| n-acetylglucosamine-6-phosphate deacetylase | DRW42_03920 | Not Available | Negative | 927042 - 928133 | 39635.7 |
| metallophosphoesterase | DRW42_03925 | Not Available | Positive | 928219 - 929424 | 45596.4 |
| elongation factor ts | DRW42_03930 | Not Available | Negative | 929720 - 930565 | 29747.5 |
| 30s ribosomal protein s2 | DRW42_03935 | Not Available | Negative | 930695 - 931528 | 30849.3 |
| 30s ribosomal protein s9 | DRW42_03940 | Not Available | Negative | 931547 - 931933 | 14159.5 |
| 50s ribosomal protein l13 | DRW42_03945 | Not Available | Negative | 931937 - 932380 | 16374.1 |
| orf6n domain-containing protein | DRW42_03950 | Not Available | Negative | 932810 - 933349 | 20793.4 |
| atpase | DRW42_03955 | Not Available | Negative | 933394 - 934359 | 37542.2 |
| nicotinamide riboside transporter pnuc | DRW42_03960 | Not Available | Negative | 934356 - 935018 | 25703.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

