Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4292 domain-containing protein | DRW42_03815 | Not Available | Positive | 893260 - 894051 | 29379.8 |
| peptidase m23 | DRW42_03820 | Not Available | Positive | 894237 - 895532 | 48363.0 |
| twin-arginine translocase tata/tate family subunit | DRW42_03825 | Not Available | Positive | 895575 - 895937 | 13385.0 |
| twin-arginine translocase tata/tate family subunit | DRW42_03830 | Not Available | Positive | 895973 - 896149 | 6208.73 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit a | DRW42_03835 | Not Available | Positive | 896168 - 897586 | 51319.2 |
| lytic transglycosylase | DRW42_03840 | Not Available | Positive | 897755 - 899158 | 52348.4 |
| phospholipase c, phosphocholine-specific | DRW42_03845 | Not Available | Positive | 899297 - 901816 | 94489.2 |
| nadp-dependent malic enzyme | DRW42_03850 | Not Available | Positive | 901938 - 904256 | 84358.6 |
| holliday junction branch migration protein ruva | DRW42_03855 | Not Available | Positive | 904263 - 904847 | 21325.1 |
| cell surface protein spra | DRW42_03860 | Not Available | Positive | 904859 - 912061 | 269090.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

