Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | DRW42_03150 | Not Available | Negative | 755409 - 756206 | 27805.2 |
| transcriptional regulator | DRW42_03155 | Not Available | Positive | 756398 - 756754 | 13743.9 |
| thioesterase | DRW42_03160 | Not Available | Negative | 757427 - 757897 | 17069.9 |
| hexitol phosphatase hxpb | DRW42_03165 | Not Available | Negative | 757914 - 758597 | 25268.6 |
| n-acetyltransferase | DRW42_03170 | Not Available | Negative | 758633 - 759157 | 20138.0 |
| qace family quaternary ammonium compound efflux smr transporter | DRW42_03175 | Not Available | Negative | 759311 - 759643 | 12027.2 |
| plp-dependent aminotransferase family protein | DRW42_03180 | Not Available | Negative | 759753 - 761165 | 52962.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DRW42_03185 | Not Available | Positive | 761235 - 763148 | 70470.1 |
| short-chain dehydrogenase | DRW42_03190 | Not Available | Positive | 763176 - 763898 | 26283.5 |
| hypothetical protein | DRW42_03195 | Not Available | Negative | 764135 - 764353 | 8098.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

