Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | DRW42_03100 | Not Available | Negative | 747450 - 748391 | 32889.0 |
| hypothetical protein | DRW42_03105 | Not Available | Positive | 748700 - 749008 | 11107.3 |
| crp/fnr family transcriptional regulator | DRW42_03110 | Not Available | Positive | 749523 - 750110 | 22824.4 |
| short-chain dehydrogenase | DRW42_03115 | Not Available | Positive | 750346 - 751104 | 26059.1 |
| hypothetical protein | DRW42_03120 | Not Available | Positive | 751115 - 751420 | 11436.8 |
| d-alanyl-d-alanine carboxypeptidase | DRW42_03125 | Not Available | Negative | 751444 - 752814 | 50327.2 |
| hypothetical protein | DRW42_03130 | Not Available | Negative | 752943 - 753536 | 22844.4 |
| hypothetical protein | DRW42_03135 | Not Available | Positive | 753901 - 754404 | 18763.5 |
| hypothetical protein | DRW42_03140 | Not Available | Positive | 754497 - 754769 | 10255.2 |
| nuclear transport factor 2 family protein | DRW42_03145 | Not Available | Negative | 755066 - 755389 | 12060.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

