Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_03000 | Not Available | Negative | 722290 - 722478 | 7099.15 |
| hypothetical protein | DRW42_03005 | Not Available | Positive | 722447 - 723751 | 46259.7 |
| hypothetical protein | DRW42_03010 | Not Available | Positive | 724012 - 724884 | 32686.0 |
| nuclear transport factor 2 family protein | DRW42_03015 | Not Available | Positive | 724944 - 725336 | 15264.1 |
| duf92 domain-containing protein | DRW42_03020 | Not Available | Negative | 725470 - 726186 | 25293.8 |
| nuclear transport factor 2 family protein | DRW42_03025 | Not Available | Positive | 726400 - 726804 | 15254.4 |
| voc family protein | DRW42_03030 | Not Available | Negative | 726907 - 727341 | 16087.8 |
| nad(p)-dependent oxidoreductase | DRW42_03035 | Not Available | Negative | 727421 - 728269 | 29768.7 |
| glyoxalase | DRW42_03040 | Not Available | Negative | 728382 - 728780 | 14803.4 |
| rna polymerase sigma-70 factor | DRW42_03045 | Not Available | Positive | 729578 - 730186 | 23280.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

