Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | DRW42_02950 | Not Available | Positive | 702541 - 705720 | 120516.0 |
| two-component system response regulator | DRW42_02955 | Not Available | Positive | 705723 - 706493 | 29504.9 |
| gfo/idh/moca family oxidoreductase | DRW42_02960 | Not Available | Negative | 707113 - 708468 | 50471.8 |
| hypothetical protein | DRW42_02965 | Not Available | Negative | 708472 - 709209 | 27517.9 |
| beta-xylosidase | DRW42_02970 | Not Available | Positive | 709722 - 711407 | 62786.2 |
| hypothetical protein | DRW42_02975 | Not Available | Negative | 712807 - 713805 | 38776.0 |
| ragb/susd family nutrient uptake outer membrane protein | DRW42_02980 | Not Available | Negative | 713825 - 715903 | 78517.2 |
| susc/raga family protein | DRW42_02985 | Not Available | Negative | 715916 - 718990 | 114847.0 |
| hypothetical protein | DRW42_02990 | Not Available | Negative | 719015 - 720397 | 52196.6 |
| crp/fnr family transcriptional regulator | DRW42_02995 | Not Available | Positive | 721298 - 721855 | 21836.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

