Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_02900 | Not Available | Positive | 690425 - 690955 | 20132.5 |
| hypothetical protein | DRW42_02905 | Not Available | Positive | 691119 - 691973 | 31783.5 |
| abc transporter atp-binding protein | DRW42_02910 | Not Available | Positive | 692177 - 694006 | 67002.8 |
| hypothetical protein | DRW42_02915 | Not Available | Negative | 694424 - 694915 | 19265.9 |
| alpha-ketoglutarate-dependent dioxygenase alkb | DRW42_02920 | Not Available | Negative | 694929 - 695543 | 22985.7 |
| hypothetical protein | DRW42_02925 | Not Available | Negative | 695521 - 695745 | 8603.34 |
| glycosyl hydrolase | DRW42_02930 | Not Available | Negative | 695855 - 696961 | 42715.5 |
| hypothetical protein | DRW42_02935 | Not Available | Negative | 697036 - 697383 | 13038.8 |
| ragb/susd family nutrient uptake outer membrane protein | DRW42_02940 | Not Available | Negative | 697441 - 699108 | 62023.6 |
| susc/raga family tonb-linked outer membrane protein | DRW42_02945 | Not Available | Negative | 699120 - 702173 | 112223.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

