Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | DRW42_28145 | Not Available | Negative | 6609786 - 6611066 | 46733.2 |
| transcriptional repressor | DRW42_28150 | Not Available | Negative | 6611105 - 6611602 | 19226.0 |
| rela/spot family protein | DRW42_28155 | Not Available | Negative | 6611794 - 6614001 | 83679.2 |
| duf4294 domain-containing protein | DRW42_28160 | Not Available | Positive | 6614111 - 6614725 | 23626.7 |
| glutathione peroxidase | DRW42_28165 | Not Available | Positive | 6614733 - 6615245 | 19530.5 |
| bacillithiol biosynthesis deacetylase bshb1 | DRW42_28170 | Not Available | Positive | 6615252 - 6615968 | 26806.2 |
| acyl-coa dehydrogenase | DRW42_28175 | Not Available | Positive | 6616161 - 6617522 | 50468.2 |
| hypothetical protein | DRW42_28180 | Not Available | Negative | 6618085 - 6618291 | 7804.51 |
| hypothetical protein | DRW42_28185 | Not Available | Positive | 6618647 - 6619026 | 12890.3 |
| hypothetical protein | DRW42_28190 | Not Available | Positive | 6618960 - 6626842 | 264860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

