Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 6513018 - 6513091 | Not Available |
| rna methyltransferase | DRW42_27745 | Not Available | Negative | 6513151 - 6513897 | 27730.7 |
| hypothetical protein | DRW42_27750 | Not Available | Positive | 6513888 - 6516311 | 92056.1 |
| hypothetical protein | DRW42_27755 | Not Available | Negative | 6516313 - 6516879 | 22009.6 |
| hypothetical protein | DRW42_27760 | Not Available | Negative | 6517413 - 6517943 | 19841.4 |
| patatin | DRW42_27765 | Not Available | Negative | 6517940 - 6520231 | 86818.4 |
| tryptophan-rich sensory protein | DRW42_27770 | Not Available | Negative | 6520288 - 6520761 | 17996.7 |
| peptidase m28 | DRW42_27775 | Not Available | Negative | 6520804 - 6522153 | 50036.4 |
| hypothetical protein | DRW42_27780 | Not Available | Negative | 6522298 - 6522918 | 22358.6 |
| dna-binding response regulator | DRW42_27785 | Not Available | Positive | 6523166 - 6523861 | 26330.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

