Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | DRW42_02695 | Not Available | Positive | 636024 - 637631 | 59078.0 |
| hypothetical protein | DRW42_02700 | Not Available | Negative | 637916 - 639112 | 45909.5 |
| hypothetical protein | DRW42_02705 | Not Available | Negative | 639123 - 640838 | 64432.5 |
| susc/raga family tonb-linked outer membrane protein | DRW42_02710 | Not Available | Negative | 640851 - 644117 | 118960.0 |
| galactose oxidase | DRW42_02715 | Not Available | Negative | 644829 - 647384 | 98421.4 |
| beta-glucosidase | DRW42_02720 | Not Available | Negative | 647905 - 650235 | 86416.6 |
| rok family protein | DRW42_02725 | Not Available | Negative | 650371 - 651231 | 31813.5 |
| hypothetical protein | DRW42_02730 | Not Available | Negative | 651636 - 652547 | 34628.4 |
| type vi secretion protein | DRW42_02735 | Not Available | Negative | 652560 - 652859 | 9728.13 |
| rhs element vgr protein | DRW42_02740 | Not Available | Negative | 652876 - 654675 | 63924.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

