Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_27690 | Not Available | Positive | 6503964 - 6504536 | 21726.3 |
| abc transporter atp-binding protein | DRW42_27695 | Not Available | Negative | 6504764 - 6506671 | 71972.9 |
| transcriptional regulator | DRW42_27700 | Not Available | Positive | 6506852 - 6507262 | 14703.5 |
| nad(p)-dependent oxidoreductase | DRW42_27705 | Not Available | Positive | 6507326 - 6507976 | 23200.4 |
| dihydroorotate dehydrogenase (quinone) | DRW42_27710 | Not Available | Positive | 6508335 - 6509363 | 38155.2 |
| mbl fold metallo-hydrolase | DRW42_27715 | Not Available | Negative | 6509493 - 6510623 | 42770.5 |
| epimerase | DRW42_27720 | Not Available | Negative | 6510636 - 6511283 | 24461.3 |
| dna alkylation repair protein | DRW42_27725 | Not Available | Negative | 6511384 - 6512049 | 25282.5 |
| hypothetical protein | DRW42_27730 | Not Available | Positive | 6512121 - 6512462 | 13266.3 |
| spore protein | DRW42_27735 | Not Available | Negative | 6512813 - 6512983 | 6257.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

