Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_27640 | Not Available | Positive | 6491201 - 6492139 | 35765.6 |
| hypothetical protein | DRW42_27645 | Not Available | Negative | 6492458 - 6494323 | 71270.4 |
| hypothetical protein | DRW42_27650 | Not Available | Negative | 6494350 - 6494784 | 17008.4 |
| hypothetical protein | DRW42_27655 | Not Available | Positive | 6494964 - 6495485 | 20143.2 |
| hypothetical protein | DRW42_27660 | Not Available | Positive | 6495496 - 6495981 | 19172.9 |
| pkd domain-containing protein | DRW42_27665 | Not Available | Positive | 6496016 - 6496993 | 36058.8 |
| vwa domain-containing protein | DRW42_27670 | Not Available | Positive | 6497033 - 6499408 | 88497.8 |
| atp-dependent clp protease atp-binding subunit | DRW42_27675 | Not Available | Positive | 6499414 - 6501930 | 93580.5 |
| hypothetical protein | DRW42_27680 | Not Available | Positive | 6501987 - 6502433 | 16845.8 |
| type vi secretion system contractile sheath protein tssc | DRW42_27685 | Not Available | Positive | 6502452 - 6503840 | 52588.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

