Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb family protein | DRW42_27490 | Not Available | Negative | 6446475 - 6446969 | 18583.3 |
| arac family transcriptional regulator | DRW42_27495 | Not Available | Positive | 6447103 - 6448062 | 35904.1 |
| hypothetical protein | DRW42_27500 | Not Available | Negative | 6448464 - 6448676 | 8155.85 |
| arac family transcriptional regulator | DRW42_27505 | Not Available | Negative | 6449227 - 6450096 | 33478.4 |
| l-fucose:h+ symporter permease | DRW42_27510 | Not Available | Positive | 6450422 - 6451732 | 47808.3 |
| altronate dehydratase | DRW42_27515 | Not Available | Positive | 6451912 - 6453549 | 59499.2 |
| hypothetical protein | DRW42_27520 | Not Available | Positive | 6453557 - 6453736 | 6922.67 |
| short chain dehydrogenase | DRW42_27525 | Not Available | Positive | 6453733 - 6454515 | 28263.7 |
| glucose dehydrogenase | DRW42_27530 | Not Available | Negative | 6454945 - 6456183 | 45733.6 |
| glycoside hydrolase family 2 | DRW42_27535 | Not Available | Negative | 6456200 - 6458953 | 103094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

