Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | DRW42_27290 | Not Available | Positive | 6399373 - 6400116 | 27374.9 |
| gliding motility lipoprotein gldd | DRW42_27295 | Not Available | Positive | 6400186 - 6400773 | 23168.7 |
| mbl fold metallo-hydrolase | DRW42_27300 | Not Available | Positive | 6400819 - 6401457 | 23700.2 |
| abc transporter permease | DRW42_27305 | Not Available | Positive | 6401485 - 6402786 | 47967.8 |
| hypothetical protein | DRW42_27310 | Not Available | Positive | 6402788 - 6403171 | 14167.1 |
| hypothetical protein | DRW42_27315 | Not Available | Positive | 6404221 - 6404433 | 7918.69 |
| susc/raga family tonb-linked outer membrane protein | DRW42_27320 | Not Available | Positive | 6405090 - 6408194 | 113894.0 |
| ragb/susd family nutrient uptake outer membrane protein | DRW42_27325 | Not Available | Positive | 6408242 - 6410005 | 66230.9 |
| hypothetical protein | DRW42_27330 | Not Available | Positive | 6410031 - 6411017 | 36114.5 |
| rna polymerase sigma-70 factor | DRW42_27335 | Not Available | Negative | 6411148 - 6411726 | 22513.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

