Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | DRW42_27040 | Not Available | Negative | 6331187 - 6331597 | 15622.1 |
| ferritin | DRW42_27045 | Not Available | Negative | 6331635 - 6332159 | 20187.1 |
| (d)cmp kinase | DRW42_27050 | Not Available | Positive | 6332289 - 6332969 | 25649.5 |
| duf1080 domain-containing protein | DRW42_27055 | Not Available | Positive | 6333363 - 6334190 | 31092.3 |
| hypothetical protein | DRW42_27060 | Not Available | Positive | 6334249 - 6335748 | 56113.1 |
| hypothetical protein | DRW42_27065 | Not Available | Positive | 6335950 - 6336927 | 36378.9 |
| 30s ribosomal protein s1 | DRW42_27070 | Not Available | Positive | 6337569 - 6339503 | 71509.1 |
| beta-n-acetylhexosaminidase | DRW42_27075 | Not Available | Positive | 6339923 - 6341599 | 64514.6 |
| arac family transcriptional regulator | DRW42_27080 | Not Available | Negative | 6341596 - 6342522 | 35475.7 |
| aldehyde dehydrogenase | DRW42_27085 | Not Available | Positive | 6342825 - 6344330 | 54909.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

