Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | DRW42_26890 | Not Available | Negative | 6297382 - 6297807 | 14839.9 |
| 50s ribosomal protein l21 | DRW42_26895 | Not Available | Negative | 6297861 - 6298172 | 11428.0 |
| hypothetical protein | DRW42_26900 | Not Available | Positive | 6298674 - 6299630 | 35569.7 |
| hypothetical protein | DRW42_26905 | Not Available | Positive | 6299627 - 6302287 | 99899.0 |
| hypothetical protein | DRW42_26910 | Not Available | Negative | 6302505 - 6304001 | 57046.3 |
| blai/meci/copy family transcriptional regulator | DRW42_26915 | Not Available | Negative | 6304007 - 6304369 | 14026.9 |
| hypothetical protein | DRW42_26920 | Not Available | Negative | 6304954 - 6305454 | 19272.4 |
| dicarboxylate/amino acid:cation symporter | DRW42_26925 | Not Available | Negative | 6305588 - 6306970 | 49943.9 |
| rna polymerase sigma factor | DRW42_26930 | Not Available | Positive | 6307273 - 6307770 | 19451.3 |
| hypothetical protein | DRW42_26935 | Not Available | Positive | 6307757 - 6308356 | 23210.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

