Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_26790 | Not Available | Positive | 6265691 - 6268525 | 105241.0 |
| ragb/susd family nutrient uptake outer membrane protein | DRW42_26795 | Not Available | Positive | 6268537 - 6270285 | 64613.4 |
| susc/raga family tonb-linked outer membrane protein | DRW42_26800 | Not Available | Positive | 6270301 - 6273426 | 115669.0 |
| hypothetical protein | DRW42_26805 | Not Available | Positive | 6273444 - 6275234 | 66508.7 |
| hypothetical protein | DRW42_26810 | Not Available | Positive | 6275536 - 6275826 | 11139.4 |
| hypothetical protein | DRW42_26815 | Not Available | Positive | 6276058 - 6277485 | 51324.5 |
| hypothetical protein | DRW42_26820 | Not Available | Positive | 6277586 - 6278935 | 51223.2 |
| beta-hexosaminidase | DRW42_26825 | Not Available | Positive | 6278935 - 6280530 | 60580.4 |
| alpha-l-fucosidase | DRW42_26830 | Not Available | Positive | 6280547 - 6282049 | 57052.3 |
| beta-galactosidase | DRW42_26835 | Not Available | Positive | 6282227 - 6284290 | 78326.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

