Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_02595 | Not Available | Positive | 603245 - 603799 | 20241.1 |
| crp/fnr family transcriptional regulator | DRW42_02600 | Not Available | Positive | 603977 - 604591 | 23531.4 |
| metallophosphoesterase | DRW42_02605 | Not Available | Negative | 604593 - 605330 | 28120.6 |
| tonb-dependent receptor | DRW42_02610 | Not Available | Positive | 605829 - 609161 | 121622.0 |
| s1/p1 nuclease | DRW42_02615 | Not Available | Positive | 609219 - 610001 | 29371.1 |
| alkaline phosphatase family protein | DRW42_02620 | Not Available | Positive | 610009 - 611280 | 47960.6 |
| glycerophosphodiester phosphodiesterase | DRW42_02625 | Not Available | Positive | 611287 - 612201 | 33711.7 |
| esterase | DRW42_02630 | Not Available | Positive | 612836 - 613465 | 23546.2 |
| glycoside hydrolase family 92 protein | DRW42_02635 | Not Available | Negative | 614504 - 616723 | 82852.1 |
| laci family transcriptional regulator | DRW42_02640 | Not Available | Negative | 616826 - 617893 | 39760.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

