Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrf2 family transcriptional regulator | DRW42_26530 | Not Available | Negative | 6183548 - 6183994 | 16374.2 |
| metallophosphoesterase | DRW42_26535 | Not Available | Positive | 6184399 - 6185430 | 38833.7 |
| tonb-dependent siderophore receptor | DRW42_26540 | Not Available | Negative | 6185553 - 6187988 | 87718.5 |
| decarboxylase | DRW42_26545 | Not Available | Positive | 6188305 - 6189846 | 57957.4 |
| iuca/iucc family protein | DRW42_26550 | Not Available | Positive | 6189797 - 6192250 | 93790.7 |
| alcaligin biosynthesis protein | DRW42_26555 | Not Available | Positive | 6192252 - 6193631 | 52472.3 |
| iuca/iucc family siderophore biosynthesis protein | DRW42_26560 | Not Available | Positive | 6193972 - 6195783 | 69206.3 |
| hypothetical protein | DRW42_26565 | Not Available | Positive | 6196505 - 6196978 | 17256.8 |
| rna polymerase sigma-70 factor | DRW42_26570 | Not Available | Positive | 6197535 - 6198098 | 21866.4 |
| iron dicitrate transport regulator fecr | DRW42_26575 | Not Available | Positive | 6198285 - 6199397 | 40858.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

