Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | DRW42_26330 | Not Available | Positive | 6130259 - 6131005 | 26161.8 |
| tigr02453 family protein | DRW42_26335 | Not Available | Negative | 6131699 - 6132385 | 26408.1 |
| trans-aconitate 2-methyltransferase | DRW42_26340 | Not Available | Negative | 6132594 - 6133424 | 31778.7 |
| type i methionyl aminopeptidase | DRW42_26345 | Not Available | Positive | 6133537 - 6134337 | 29527.4 |
| hypothetical protein | DRW42_26350 | Not Available | Positive | 6134851 - 6137493 | 98876.1 |
| hypothetical protein | DRW42_26355 | Not Available | Negative | 6137936 - 6138628 | 25365.3 |
| hypothetical protein | DRW42_26360 | Not Available | Negative | 6138735 - 6139613 | 31116.8 |
| hypothetical protein | DRW42_26365 | Not Available | Negative | 6139667 - 6140449 | 29260.3 |
| rna polymerase sigma factor | DRW42_26370 | Not Available | Negative | 6140442 - 6141017 | 22004.3 |
| hypothetical protein | DRW42_26375 | Not Available | Positive | 6141319 - 6142800 | 56208.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

