Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-6-naphthoate synthase | DRW42_25620 | Not Available | Positive | 5995861 - 5996700 | 31522.9 |
| dna-binding response regulator | DRW42_25625 | Not Available | Negative | 5997073 - 5997777 | 26857.6 |
| two-component sensor histidine kinase | DRW42_25630 | Not Available | Negative | 5997937 - 5999766 | 69389.9 |
| hypothetical protein | DRW42_25635 | Not Available | Positive | 5999766 - 6000005 | 8823.86 |
| hypothetical protein | DRW42_25640 | Not Available | Negative | 6000020 - 6000385 | 13413.7 |
| class i sam-dependent rna methyltransferase | DRW42_25645 | Not Available | Positive | 6000456 - 6001634 | 43866.8 |
| hypothetical protein | DRW42_25650 | Not Available | Positive | 6001700 - 6002194 | 19407.1 |
| secretion protein hlyd | DRW42_25660 | Not Available | Negative | 6004443 - 6005648 | 46117.6 |
| hypothetical protein | DRW42_25665 | Not Available | Negative | 6005729 - 6005941 | 7188.29 |
| hypothetical protein | DRW42_25670 | Not Available | Negative | 6006010 - 6006243 | 7743.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

