Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DRW42_25320 | Not Available | Positive | 5914419 - 5916029 | 59855.1 |
| duf4397 domain-containing protein | DRW42_25325 | Not Available | Positive | 5916053 - 5916850 | 28961.6 |
| tonb-dependent receptor | DRW42_25330 | Not Available | Positive | 5917123 - 5920353 | 118090.0 |
| ragb/susd family nutrient uptake outer membrane protein | DRW42_25335 | Not Available | Positive | 5920362 - 5922014 | 61509.0 |
| metallophosphoesterase | DRW42_25340 | Not Available | Negative | 5922078 - 5923910 | 67885.0 |
| port family protein | DRW42_25345 | Not Available | Negative | 5924555 - 5925157 | 21672.9 |
| hypothetical protein | DRW42_25350 | Not Available | Positive | 5925396 - 5925611 | 8397.18 |
| peptidase s41 | DRW42_25355 | Not Available | Positive | 5925790 - 5927481 | 62160.7 |
| alpha-l-fucosidase | DRW42_25360 | Not Available | Positive | 5927512 - 5928837 | 50404.3 |
| glycoside hydrolase family 92 protein | DRW42_25365 | Not Available | Positive | 5929141 - 5931399 | 84101.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

