Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_00190 | Not Available | Negative | 44916 - 45770 | 30416.6 |
| hypothetical protein | DRW42_00195 | Not Available | Negative | 46158 - 46421 | 9758.9 |
| hypothetical protein | DRW42_00200 | Not Available | Positive | 46585 - 47325 | 28568.5 |
| hypothetical protein | DRW42_00205 | Not Available | Positive | 47502 - 48638 | 43816.8 |
| cold-shock protein | DRW42_00210 | Not Available | Negative | 48967 - 49158 | 6923.15 |
| tryptophan-rich sensory protein | DRW42_00220 | Not Available | Negative | 50279 - 51058 | 29122.7 |
| peroxiredoxin | DRW42_00225 | Not Available | Negative | 51410 - 51868 | 16235.4 |
| histidine kinase | DRW42_00230 | Not Available | Positive | 52360 - 53379 | 38792.0 |
| dna-binding response regulator | DRW42_00235 | Not Available | Positive | 53360 - 54121 | 29344.7 |
| short-chain dehydrogenase | DRW42_00240 | Not Available | Negative | 54291 - 55088 | 28086.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

