Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DRW42_25165 | Not Available | Negative | 5861015 - 5862946 | 72890.3 |
| susc/raga family tonb-linked outer membrane protein | DRW42_25170 | Not Available | Negative | 5862970 - 5866269 | 122452.0 |
| arac family transcriptional regulator | DRW42_25175 | Not Available | Positive | 5866647 - 5867546 | 35074.4 |
| hypothetical protein | DRW42_25180 | Not Available | Negative | 5867783 - 5868067 | 10378.8 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DRW42_25185 | Not Available | Negative | 5868307 - 5869902 | 59478.5 |
| susc/raga family tonb-linked outer membrane protein | DRW42_25190 | Not Available | Negative | 5869910 - 5873011 | 113176.0 |
| hypothetical protein | DRW42_25195 | Not Available | Negative | 5873044 - 5874045 | 37050.3 |
| hypothetical protein | DRW42_25200 | Not Available | Negative | 5874093 - 5874869 | 29741.6 |
| rok family protein | DRW42_25205 | Not Available | Positive | 5874891 - 5875787 | 32585.0 |
| gntr family transcriptional regulator | DRW42_25210 | Not Available | Negative | 5876263 - 5876994 | 27999.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

