Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-glycerate dehydrogenase | DRW42_24965 | Not Available | Negative | 5806370 - 5807326 | 34540.9 |
| hypothetical protein | DRW42_24970 | Not Available | Negative | 5807385 - 5808194 | 30262.8 |
| hypothetical protein | DRW42_24975 | Not Available | Negative | 5808199 - 5810520 | 86856.3 |
| hypothetical protein | DRW42_24980 | Not Available | Negative | 5810615 - 5811775 | 43221.5 |
| glycosyl hydrolase family 5 | DRW42_24985 | Not Available | Negative | 5811830 - 5813581 | 66591.1 |
| glucosylceramidase | DRW42_24990 | Not Available | Negative | 5813608 - 5815014 | 51571.8 |
| ragb/susd family nutrient uptake outer membrane protein | DRW42_24995 | Not Available | Negative | 5815112 - 5816638 | 56098.1 |
| susc/raga family tonb-linked outer membrane protein | DRW42_25000 | Not Available | Negative | 5816650 - 5819793 | 114176.0 |
| transcriptional regulator | DRW42_25005 | Not Available | Negative | 5820053 - 5822971 | 112371.0 |
| hypothetical protein | DRW42_25010 | Not Available | Positive | 5823305 - 5823541 | 8631.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

