Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | DRW42_24715 | Not Available | Positive | 5737170 - 5737811 | 24126.1 |
| doxx family protein | DRW42_24720 | Not Available | Negative | 5737808 - 5738230 | 15566.7 |
| valine--trna ligase | DRW42_24725 | Not Available | Positive | 5738582 - 5741260 | 102983.0 |
| gfo/idh/moca family oxidoreductase | DRW42_24730 | Not Available | Positive | 5741579 - 5742934 | 50516.9 |
| duf1080 domain-containing protein | DRW42_24735 | Not Available | Positive | 5743031 - 5744395 | 50193.9 |
| gfo/idh/moca family oxidoreductase | DRW42_24740 | Not Available | Positive | 5744722 - 5745915 | 44405.5 |
| restriction endonuclease subunit r | DRW42_24745 | Not Available | Negative | 5746675 - 5747133 | 17674.7 |
| dna polymerase iii subunit delta | DRW42_24750 | Not Available | Positive | 5747524 - 5748543 | 38544.6 |
| hypothetical protein | DRW42_24755 | Not Available | Positive | 5748679 - 5750937 | 85022.8 |
| hypothetical protein | DRW42_24760 | Not Available | Negative | 5751400 - 5752539 | 41952.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

