Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_02395 | Not Available | Positive | 553093 - 553497 | 15020.2 |
| nuclear transport factor 2 family protein | DRW42_02400 | Not Available | Negative | 553813 - 554235 | 15737.4 |
| hypothetical protein | DRW42_02405 | Not Available | Positive | 554449 - 560046 | 207510.0 |
| transposase | DRW42_02410 | Not Available | Positive | 560251 - 560805 | 21959.0 |
| penicillin-binding protein 1c | DRW42_02415 | Not Available | Positive | 561021 - 563393 | 88840.8 |
| lysoplasmalogenase | DRW42_02420 | Not Available | Negative | 563745 - 564437 | 26502.5 |
| sterol desaturase family protein | DRW42_02425 | Not Available | Negative | 564427 - 565644 | 47663.2 |
| hypothetical protein | DRW42_02430 | Not Available | Positive | 565839 - 566189 | 12634.7 |
| duf3267 domain-containing protein | DRW42_02435 | Not Available | Negative | 566589 - 567122 | 19561.3 |
| hypothetical protein | DRW42_02440 | Not Available | Negative | 567135 - 567443 | 11342.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

