Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase ib | DRW42_24615 | Not Available | Positive | 5717810 - 5718853 | 39635.9 |
| hypothetical protein | DRW42_24620 | Not Available | Negative | 5718993 - 5719199 | 7671.92 |
| duf1343 domain-containing protein | DRW42_24625 | Not Available | Negative | 5719434 - 5720702 | 46985.2 |
| abc transporter permease | DRW42_24630 | Not Available | Positive | 5720884 - 5722104 | 46064.2 |
| hypothetical protein | DRW42_24635 | Not Available | Negative | 5722194 - 5722634 | 15918.1 |
| trna pseudouridine(38-40) synthase trua | DRW42_24640 | Not Available | Negative | 5722671 - 5723471 | 31070.5 |
| hypothetical protein | DRW42_24645 | Not Available | Positive | 5723546 - 5723929 | 14859.6 |
| nucleoside triphosphate pyrophosphohydrolase | DRW42_24650 | Not Available | Negative | 5724062 - 5724868 | 30800.5 |
| hypothetical protein | DRW42_24655 | Not Available | Negative | 5724888 - 5725337 | 16955.5 |
| hypothetical protein | DRW42_24660 | Not Available | Negative | 5725342 - 5725638 | 10731.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

