Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_24565 | Not Available | Negative | 5705524 - 5708046 | 97007.1 |
| hypothetical protein | DRW42_24570 | Not Available | Positive | 5708310 - 5709011 | 26708.3 |
| sgnh/gdsl hydrolase family protein | DRW42_24575 | Not Available | Negative | 5709428 - 5710279 | 31996.3 |
| fad-dependent monooxygenase | DRW42_24580 | Not Available | Negative | 5710526 - 5711674 | 42060.9 |
| tetr/acrr family transcriptional regulator | DRW42_24585 | Not Available | Negative | 5711655 - 5712278 | 24070.3 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | DRW42_24590 | Not Available | Negative | 5712498 - 5713367 | 31993.7 |
| hypothetical protein | DRW42_24595 | Not Available | Negative | 5713433 - 5714461 | 36362.8 |
| rna pseudouridine synthase | DRW42_24600 | Not Available | Positive | 5714564 - 5715592 | 39169.9 |
| 4-amino-4-deoxychorismate lyase | DRW42_24605 | Not Available | Positive | 5715596 - 5716435 | 31588.3 |
| methionyl-trna formyltransferase | DRW42_24610 | Not Available | Negative | 5716811 - 5717719 | 33281.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

