Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DRW42_24265 | Not Available | Negative | 5636761 - 5637345 | 22326.8 |
| duf4397 domain-containing protein | DRW42_24270 | Not Available | Negative | 5637467 - 5638192 | 26180.8 |
| abc-f family atpase | DRW42_24275 | Not Available | Negative | 5638331 - 5639953 | 61105.5 |
| hypothetical protein | DRW42_24280 | Not Available | Positive | 5640237 - 5640917 | 25090.9 |
| protease | DRW42_24285 | Not Available | Negative | 5641172 - 5642008 | 29578.7 |
| hypothetical protein | DRW42_24290 | Not Available | Positive | 5642131 - 5644962 | 102925.0 |
| peptidase m28 | DRW42_24295 | Not Available | Positive | 5645281 - 5646933 | 60541.1 |
| porin family protein | DRW42_24300 | Not Available | Negative | 5647015 - 5647617 | 21256.4 |
| nad(p)h-dependent oxidoreductase | DRW42_24305 | Not Available | Negative | 5647937 - 5648494 | 20410.6 |
| mfs transporter | DRW42_24310 | Not Available | Positive | 5648598 - 5649800 | 43325.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

