Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DRW42_24215 | Not Available | Negative | 5625059 - 5626306 | 46032.4 |
| phytanoyl-coa dioxygenase | DRW42_24220 | Not Available | Positive | 5626451 - 5627413 | 36988.7 |
| hypothetical protein | DRW42_24225 | Not Available | Positive | 5627435 - 5628397 | 36780.6 |
| glycoside hydrolase family 25 protein | DRW42_24230 | Not Available | Positive | 5628525 - 5629415 | 34474.0 |
| dipeptide epimerase | DRW42_24235 | Not Available | Negative | 5630009 - 5631106 | 40781.1 |
| duf1016 domain-containing protein | DRW42_24240 | Not Available | Negative | 5631152 - 5632135 | 38481.1 |
| thioredoxin domain-containing protein | DRW42_24245 | Not Available | Positive | 5632263 - 5634272 | 76243.2 |
| peptidylprolyl isomerase | DRW42_24250 | Not Available | Positive | 5634283 - 5634789 | 18016.9 |
| uma2 family endonuclease | DRW42_24255 | Not Available | Negative | 5634859 - 5635488 | 24133.2 |
| hypothetical protein | DRW42_24260 | Not Available | Negative | 5635530 - 5636768 | 45414.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

