Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DRW42_02345 | Not Available | Negative | 536307 - 539381 | 111416.0 |
| ragb/susd family nutrient uptake outer membrane protein | DRW42_02350 | Not Available | Negative | 539414 - 541153 | 64548.5 |
| hypothetical protein | DRW42_02355 | Not Available | Negative | 541158 - 544343 | 116538.0 |
| hypothetical protein | DRW42_02360 | Not Available | Positive | 544817 - 545836 | 38487.3 |
| mfs transporter | DRW42_02365 | Not Available | Negative | 546064 - 547293 | 44801.9 |
| hypothetical protein | DRW42_02370 | Not Available | Negative | 547262 - 547459 | 8277.61 |
| marr family transcriptional regulator | DRW42_02375 | Not Available | Positive | 547464 - 547907 | 16919.6 |
| mbl fold metallo-hydrolase | DRW42_02380 | Not Available | Positive | 547954 - 548790 | 31397.6 |
| glutathione peroxidase | DRW42_02385 | Not Available | Negative | 549433 - 549945 | 19259.3 |
| type i dna topoisomerase | DRW42_02390 | Not Available | Positive | 550364 - 552928 | 96237.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

