Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase/reductase | DRW42_24065 | Not Available | Negative | 5586123 - 5586983 | 31523.0 |
| tonb-dependent receptor | DRW42_24070 | Not Available | Positive | 5587279 - 5589678 | 87907.8 |
| tetr/acrr family transcriptional regulator | DRW42_24075 | Not Available | Positive | 5590008 - 5590592 | 21775.7 |
| hypothetical protein | DRW42_24080 | Not Available | Positive | 5590643 - 5591107 | 17560.1 |
| duf3817 domain-containing protein | DRW42_24085 | Not Available | Positive | 5591123 - 5591467 | 12886.4 |
| hypothetical protein | DRW42_24090 | Not Available | Positive | 5591468 - 5592451 | 36851.8 |
| cusa/czca family heavy metal efflux rnd transporter | DRW42_24095 | Not Available | Negative | 5592706 - 5595822 | 115411.0 |
| efflux transporter periplasmic adaptor subunit | DRW42_24100 | Not Available | Negative | 5595850 - 5596938 | 39709.7 |
| tolc family protein | DRW42_24105 | Not Available | Negative | 5596944 - 5598209 | 47970.7 |
| two-component sensor histidine kinase | DRW42_24110 | Not Available | Negative | 5598928 - 5600280 | 51511.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

