Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | DRW42_24015 | Not Available | Positive | 5577335 - 5578498 | 42880.0 |
| xylose isomerase | DRW42_24020 | Not Available | Positive | 5578502 - 5579674 | 43651.8 |
| alkaline phosphatase family protein | DRW42_24025 | Not Available | Positive | 5579679 - 5581028 | 51261.3 |
| neomenthol dehydrogenase | DRW42_24030 | Not Available | Positive | 5581228 - 5581950 | 26028.9 |
| arac family transcriptional regulator | DRW42_24035 | Not Available | Positive | 5582003 - 5582917 | 35273.9 |
| hypothetical protein | DRW42_24040 | Not Available | Positive | 5582987 - 5583229 | 8960.23 |
| hypothetical protein | DRW42_24045 | Not Available | Positive | 5583187 - 5583417 | 8361.99 |
| arac family transcriptional regulator | DRW42_24050 | Not Available | Positive | 5583842 - 5584654 | 31135.2 |
| hypothetical protein | DRW42_24055 | Not Available | Negative | 5584666 - 5585070 | 15185.3 |
| arac family transcriptional regulator | DRW42_24060 | Not Available | Negative | 5585132 - 5586055 | 35499.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

