Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase | DRW42_23810 | Not Available | Positive | 5536479 - 5537087 | 24005.7 |
| hypothetical protein | DRW42_23815 | Not Available | Positive | 5537090 - 5538592 | 54887.8 |
| hypothetical protein | DRW42_23820 | Not Available | Positive | 5538740 - 5539006 | 10152.2 |
| dna-protecting protein dpra | DRW42_23825 | Not Available | Positive | 5539056 - 5540150 | 40114.9 |
| cystathionine beta-synthase | DRW42_23830 | Not Available | Positive | 5540379 - 5541740 | 49730.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DRW42_23835 | Not Available | Negative | 5542247 - 5543572 | 48160.8 |
| duf4290 domain-containing protein | DRW42_23840 | Not Available | Negative | 5543636 - 5544325 | 26791.6 |
| histidine phosphatase family protein | DRW42_23845 | Not Available | Negative | 5544631 - 5545128 | 18580.0 |
| heptosyltransferase | DRW42_23850 | Not Available | Negative | 5545121 - 5546152 | 38357.5 |
| hypothetical protein | DRW42_23855 | Not Available | Negative | 5546223 - 5546825 | 23469.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

