Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase | DRW42_02295 | Not Available | Negative | 518422 - 519888 | 54637.7 |
| glucuronyl hydrolase | DRW42_02300 | Not Available | Negative | 520077 - 521252 | 44152.4 |
| alginate lyase | DRW42_02305 | Not Available | Negative | 521254 - 522441 | 44792.1 |
| glycoside hydrolase family 2 | DRW42_02310 | Not Available | Negative | 522468 - 524930 | 93240.9 |
| duf5009 domain-containing protein | DRW42_02315 | Not Available | Negative | 524942 - 526117 | 43921.5 |
| glycoside hydrolase family 2 | DRW42_02320 | Not Available | Negative | 526131 - 528773 | 99221.2 |
| glycosyl hydrolase | DRW42_02325 | Not Available | Negative | 529222 - 531438 | 81577.2 |
| endo-1,4-beta-xylanase | DRW42_02330 | Not Available | Negative | 531453 - 532550 | 40486.0 |
| beta-glucuronidase | DRW42_02335 | Not Available | Negative | 532552 - 534381 | 70313.4 |
| ragb/susd family nutrient uptake outer membrane protein | DRW42_02340 | Not Available | Negative | 534484 - 536211 | 64036.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

