Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | Positive | 5492965 - 5493035 | Not Available |
| hypothetical protein | DRW42_23565 | Not Available | Positive | 5493234 - 5493416 | 7229.08 |
| duf4833 domain-containing protein | DRW42_23570 | Not Available | Positive | 5493454 - 5494035 | 22157.6 |
| hypothetical protein | DRW42_23575 | Not Available | Negative | 5494200 - 5494478 | 10244.4 |
| hypothetical protein | DRW42_23580 | Not Available | Negative | 5494569 - 5495036 | 17315.4 |
| deaminase | DRW42_23585 | Not Available | Negative | 5495072 - 5496397 | 48634.7 |
| arac family transcriptional regulator | DRW42_23590 | Not Available | Negative | 5496534 - 5497379 | 33165.1 |
| alkaline phosphatase family protein | DRW42_23595 | Not Available | Negative | 5498219 - 5499574 | 49136.2 |
| transcriptional regulator | DRW42_23600 | Not Available | Negative | 5499755 - 5500147 | 14830.3 |
| nmra/hscarg family protein | DRW42_23605 | Not Available | Positive | 5500254 - 5501231 | 36403.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

