Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aquaporin | DRW42_23310 | Not Available | Positive | 5419548 - 5420285 | 25550.6 |
| hypothetical protein | DRW42_23315 | Not Available | Negative | 5420537 - 5421820 | 47944.1 |
| insulinase family protein | DRW42_23320 | Not Available | Negative | 5421833 - 5423206 | 52933.9 |
| 3'-5' exonuclease | DRW42_23325 | Not Available | Positive | 5423327 - 5424031 | 27477.1 |
| signal transduction protein | DRW42_23330 | Not Available | Positive | 5424021 - 5425472 | 55201.6 |
| 50s ribosomal protein l20 | DRW42_23335 | Not Available | Negative | 5425871 - 5426215 | 12995.0 |
| 50s ribosomal protein l35 | DRW42_23340 | Not Available | Negative | 5426291 - 5426491 | 7255.12 |
| translation initiation factor if-3 | DRW42_23345 | Not Available | Negative | 5426521 - 5427090 | 21467.3 |
| threonine--trna ligase | DRW42_23350 | Not Available | Negative | 5427108 - 5429033 | 73026.1 |
| hypothetical protein | DRW42_23355 | Not Available | Negative | 5429149 - 5429643 | 18594.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

