Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosylasparaginase | DRW42_23205 | Not Available | Positive | 5397992 - 5399026 | 37168.8 |
| hypothetical protein | DRW42_23210 | Not Available | Positive | 5399060 - 5399938 | 33247.2 |
| copper homeostasis protein cutc | DRW42_23215 | Not Available | Positive | 5399966 - 5400739 | 28209.2 |
| d-alanine--d-alanine ligase | DRW42_23220 | Not Available | Negative | 5400881 - 5401867 | 36591.9 |
| serine/threonine protein kinase | DRW42_23225 | Not Available | Positive | 5402172 - 5402942 | 27961.9 |
| endolytic transglycosylase mltg | DRW42_23230 | Not Available | Positive | 5402961 - 5404016 | 39856.3 |
| acyl-coa thioesterase | DRW42_23235 | Not Available | Positive | 5404016 - 5404423 | 15873.4 |
| yihy/virulence factor brkb family protein | DRW42_23240 | Not Available | Positive | 5404432 - 5405421 | 37795.3 |
| Trna-ser | Not Available | Not Available | Positive | 5405518 - 5405605 | Not Available |
| dna alkylation repair protein | DRW42_23250 | Not Available | Positive | 5405897 - 5406556 | 25791.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

