Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DRW42_02245 | Not Available | Positive | 509064 - 509582 | 19993.7 |
| alkene reductase | DRW42_02250 | Not Available | Negative | 509716 - 510831 | 40730.6 |
| bile acid:sodium symporter | DRW42_02255 | Not Available | Negative | 510836 - 511831 | 36117.8 |
| methionine synthase | DRW42_02260 | Not Available | Negative | 511849 - 512883 | 38568.2 |
| duf1852 domain-containing protein | DRW42_02265 | Not Available | Negative | 512906 - 513913 | 38778.6 |
| asnc family transcriptional regulator | DRW42_02270 | Not Available | Positive | 514438 - 514899 | 17590.2 |
| Trna-arg | Not Available | Not Available | Positive | 515363 - 515436 | Not Available |
| hypothetical protein | DRW42_02280 | Not Available | Negative | 515656 - 515889 | 8937.2 |
| mannonate dehydratase | DRW42_02285 | Not Available | Negative | 516352 - 517515 | 43592.0 |
| d-mannonate oxidoreductase | DRW42_02290 | Not Available | Negative | 517579 - 518403 | 29149.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

