Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine dehydrogenase | DRW42_23155 | Not Available | Positive | 5387869 - 5389113 | 46647.6 |
| hypothetical protein | DRW42_23160 | Not Available | Negative | 5389189 - 5389533 | 13558.7 |
| xre family transcriptional regulator | DRW42_23165 | Not Available | Negative | 5389536 - 5390336 | 30821.7 |
| hypothetical protein | DRW42_23170 | Not Available | Negative | 5390504 - 5390950 | 16941.5 |
| vut family protein | DRW42_23175 | Not Available | Negative | 5390976 - 5391746 | 28655.8 |
| bcr/cfla family drug resistance efflux transporter | DRW42_23180 | Not Available | Positive | 5391948 - 5393174 | 44039.1 |
| peptidase | DRW42_23185 | Not Available | Negative | 5393253 - 5393792 | 20060.6 |
| duf2271 domain-containing protein | DRW42_23190 | Not Available | Negative | 5393908 - 5395434 | 56014.7 |
| methionine aminotransferase | DRW42_23195 | Not Available | Positive | 5395687 - 5396832 | 42678.6 |
| amidohydrolase | DRW42_23200 | Not Available | Positive | 5396878 - 5397660 | 30698.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

