Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpf/raia family ribosome-associated protein | DRW42_23105 | Not Available | Positive | 5377705 - 5378019 | 11601.8 |
| hypothetical protein | DRW42_23110 | Not Available | Negative | 5378094 - 5378699 | 23300.9 |
| radical sam protein | DRW42_23115 | Not Available | Negative | 5378711 - 5379439 | 27219.3 |
| histidine phosphatase family protein | DRW42_23120 | Not Available | Negative | 5379472 - 5380095 | 24004.6 |
| aminofutalosine synthase mqne | DRW42_23125 | Not Available | Negative | 5380224 - 5381417 | 46109.0 |
| hypothetical protein | DRW42_23130 | Not Available | Negative | 5381751 - 5382197 | 15916.0 |
| cystathionine gamma-synthase | DRW42_23135 | Not Available | Positive | 5382369 - 5383484 | 40528.7 |
| hypothetical protein | DRW42_23140 | Not Available | Negative | 5383678 - 5384691 | 36762.5 |
| bifunctional o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DRW42_23145 | Not Available | Positive | 5385276 - 5386607 | 47826.6 |
| homoserine o-acetyltransferase | DRW42_23150 | Not Available | Positive | 5386639 - 5387697 | 39346.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

