Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | DRW42_23055 | Not Available | Positive | 5366971 - 5367324 | 13670.5 |
| hypothetical protein | DRW42_23060 | Not Available | Negative | 5367443 - 5367637 | 7227.83 |
| sensor histidine kinase | DRW42_23065 | Not Available | Negative | 5367634 - 5368722 | 40242.4 |
| metal-independent alpha-mannosidase | DRW42_23070 | Not Available | Negative | 5369029 - 5370453 | 53316.6 |
| hypothetical protein | DRW42_23075 | Not Available | Positive | 5370729 - 5371916 | 45362.7 |
| thioredoxin family protein | DRW42_23080 | Not Available | Negative | 5371913 - 5372518 | 21789.2 |
| tlpa family protein disulfide reductase | DRW42_23085 | Not Available | Negative | 5372525 - 5372992 | 18013.2 |
| hydrolase | DRW42_23090 | Not Available | Negative | 5373145 - 5373669 | 19452.4 |
| dna mismatch repair protein muts | DRW42_23095 | Not Available | Negative | 5373805 - 5376417 | 97972.6 |
| hypothetical protein | DRW42_23100 | Not Available | Positive | 5376954 - 5377634 | 26882.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

