Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase large subunit | DRW42_22555 | Not Available | Positive | 5243460 - 5247959 | 164524.0 |
| glutamate synthase | DRW42_22560 | Not Available | Positive | 5247963 - 5249429 | 53238.9 |
| fusc family protein | DRW42_22565 | Not Available | Negative | 5250071 - 5252230 | 82713.4 |
| hypothetical protein | DRW42_22570 | Not Available | Positive | 5252972 - 5253193 | 7974.67 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | DRW42_22575 | Not Available | Positive | 5253193 - 5253474 | 10781.3 |
| ribonuclease | DRW42_22580 | Not Available | Positive | 5253541 - 5254893 | 50708.0 |
| hypothetical protein | DRW42_22585 | Not Available | Negative | 5255142 - 5257436 | 86519.3 |
| tetracycline resistance mfs efflux pump | DRW42_22590 | Not Available | Negative | 5257546 - 5258757 | 43736.4 |
| dna gyrase subunit a | DRW42_22595 | Not Available | Positive | 5259235 - 5261826 | 97022.0 |
| hypothetical protein | DRW42_22600 | Not Available | Positive | 5261853 - 5262941 | 39862.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

