Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit c | DRW42_22350 | Not Available | Negative | 5192599 - 5192889 | 11123.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DRW42_22355 | Not Available | Negative | 5192891 - 5193616 | 28082.2 |
| tryptophan--trna ligase | DRW42_22360 | Not Available | Positive | 5194172 - 5195170 | 37560.9 |
| deoxynucleoside kinase | DRW42_22365 | Not Available | Positive | 5195249 - 5195863 | 23709.2 |
| hypothetical protein | DRW42_22370 | Not Available | Positive | 5195908 - 5196114 | 8432.37 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DRW42_22375 | Not Available | Positive | 5196111 - 5196878 | 28611.4 |
| marr family transcriptional regulator | DRW42_22380 | Not Available | Negative | 5197080 - 5198033 | 35978.6 |
| hypothetical protein | DRW42_22385 | Not Available | Positive | 5198137 - 5198706 | 21731.3 |
| hypothetical protein | DRW42_22390 | Not Available | Positive | 5198806 - 5199306 | 19124.8 |
| hypothetical protein | DRW42_22395 | Not Available | Positive | 5199539 - 5199721 | 6882.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

